Motif View

Internal ID 1761170
Source Database TransTermHP TERM 899
Feature Type terminator
Name
Rho-independent transcription terminator TERM 899
Sequence GCGCCGCCCAGTGGGCGGCGC
Look for more occurrences
Start 2878096
End 2878116
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCCCCAAAAACAAC(5' tail) GCGCCGCCC(5' stem) ACT(loop) GGGCGGCGC(3' stem) TGACAGGAAAGACCC(3' tail). Confidence: 100. overlap 2878095 2878092

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685