Motif View

Internal ID 1761149
Source Database TransTermHP TERM 874
Feature Type terminator
Name
Rho-independent transcription terminator TERM 874
Sequence CGCCGCGTCCCCGAAAGGACGCGGCG
Look for more occurrences
Start 2834028
End 2834053
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCCGAATGCAAAAA(5' tail) CGCCGCGTCC(5' stem) CCGAAA(loop) GGACGCGGCG(3' stem) TTTTTTTCATCGGGC(3' tail). Confidence: 100. opp_overlap 2834028

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685