Motif View

Internal ID 1761131
Source Database TransTermHP TERM 851
Feature Type terminator
Name
Rho-independent transcription terminator TERM 851
Sequence CACCCCGCATGCTTCGCGCTGCGGGGTG
Look for more occurrences
Start 2756774
End 2756801
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGCACAAATGAAA(5' tail) CACCCCGCAGCGC(5' stem) GAA(loop) GCA-TGCGGGGTG(3' stem) GCGAAGCGGCCCCAC(3' tail). Confidence: 93. gap 1, overlap 2756793

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685