Motif View

Internal ID 1761070
Source Database TransTermHP TERM 764
Feature Type terminator
Name
Rho-independent transcription terminator TERM 764
Sequence GCCCCCGTCCGGCTCGCCGGCGGGGGC
Look for more occurrences
Start 2536890
End 2536916
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTGCACTCCGATCCT(5' tail) GCCCCCGTCCGG(5' stem) CTCG(loop) CCGG-CGGGGGC(3' stem) TTTCATTTGGCGGGC(3' tail). Confidence: 100. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685