Motif View

Internal ID 1761031
Source Database TransTermHP TERM 698
Feature Type terminator
Name
Rho-independent transcription terminator TERM 698
Sequence GGCGCAGTGATGCGCC
Look for more occurrences
Start 2335407
End 2335422
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAAAAAATGAAAAA(5' tail) GGCGCA(5' stem) TCAC(loop) TGCGCC(3' stem) TTTTTCAGGGTGCCG(3' tail). Confidence: 100. opp_overlap 2335407, overlap 2335400

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685