Motif View

Internal ID 1760878
Source Database TransTermHP TERM 497
Feature Type terminator
Name
Rho-independent transcription terminator TERM 497
Sequence CGGGGGGCGCGTATCGCACGGGACATCCCCGTGCGGTACGCGCCGCCCG
Look for more occurrences
Start 1775674
End 1775722
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCCCCAACAAAAG(5' tail) CGGGCGGCGCGTACCGCACGGG(5' stem) GATGT(loop) CCCGTGCGATACGCGCCCCCCG(3' stem) TGATGCCACATCCGT(3' tail). Confidence: 100. overlap 1775673

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685