Motif View

Internal ID 1760730
Source Database TransTermHP TERM 258
Feature Type terminator
Name
Rho-independent transcription terminator TERM 258
Sequence CGCGGCGCGGCCCTTCTGACGGGCCGCGCCGCG
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Start 733957
End 733989
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGTGCGGGCAAAAA(5' tail) CGCGGCGCGGCCCGT(5' stem) CAG(loop) AAGGGCCGCGCCGCG(3' stem) CGTGGGTCGACGTCA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685