| Internal ID | 1760463 | Source Database | TransTermHP TERM 540 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 540
|
| Sequence |
GCCGGCTCGCGTGATTCGGGCGAGCCGGC Look for more occurrences |
| Start | 2631044 |
| End | 2631072 |
| Strand | + |
| Genomic Context | |
| Replicon | Burkholderia ambifaria AMMD chromosome 2, complete sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAGCCGGACACCCAA(5' tail) GCCGGCTCGCGTG(5' stem) ATT(loop) CGGGCGAGCCGGC(3' stem) TTTTTGTCGTTCGCT(3' tail). Confidence: 100. opp_overlap 2631031 2631018 2631044, overlap 2631026 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|