Internal ID | 1586672 | Source Database | TransTermHP TERM 555 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 555
|
Sequence |
CGGGGCGCGCCTGAATGGCGCGCCCTG Look for more occurrences |
Start | 2538904 |
End | 2538930 |
Strand | - |
Genomic Context | |
Replicon | Burkholderia cenocepacia K56-2Valvano ctg7180000002940B, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GAGTGCTACAAAAAA(5' tail) CAGGGCGCGCC(5' stem) ATTCA(loop) GGCGCGCCCCG(3' stem) TCGATACTGCGGAGG(3' tail). Confidence: 100. opp_overlap 2538925 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|