Internal ID | 1586038 | Source Database | TransTermHP TERM 207 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 207
|
Sequence |
TGAAACAGCCCGATCGGTGTTGGCCGATCGGGCTGTTTCA Look for more occurrences |
Start | 514926 |
End | 514965 |
Strand | + |
Genomic Context | |
Replicon | Burkholderia cenocepacia K56-2Valvano ctg7180000002941, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | ACGACGCTTTGGAAT(5' tail) TGAAACAGCCCGATCGGT(5' stem) GTTG(loop) GCCGATCGGGCTGTTTCA(3' stem) TTTGCCGGCACGGAT(3' tail). Confidence: 100. opp_overlap 514931, overlap 514931 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|