Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSS1524
|
Name |
bopA
|
Replicon | chromosome 2 |
Genomic location | 2075849 - 2077387 (- strand) |
Comment | This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. |
RefSeq | YP_111530.1 |
GI | 53722545 |
Entrez | 3096275 |
GI | 53722545 |
INSDC | CAH38997.1 |
NCBI Locus Tag | BPSS1524 |
RefSeq | YP_111530.1,GeneID |
UniParc | UPI000043BD16 |
UniProtKB Acc | Q63K42 |
UniProtKB ID | BOPA_BURPS |
UniRef100 | UniRef100_Q3JL32 |
UniRef50 | UniRef50_A3MCH8 |
UniRef90 | UniRef90_A3MCH8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type III secretion system effector protein BopA (T3SS-3)
|
Synonyms |
putative Type III secretion system effector protein |
Evidence for Translation | |
Charge (pH 7) | 23.44 |
Kyte-Doolittle Hydrophobicity Value | -0.525 |
Molecular Weight (kDa) | 56831.6 |
Isoelectric Point (pI) | 10.36 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | VFDB : VF0428 |
Category | T3SS-3 |
Evidence |
ECO:0000314
direct assay evidence used in manual assertion
|
Host Organism | |
Notes | |
Reference | 17984080 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera
|
Burkholderia Ortholog Group |
BG019823 (317 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSS1524
Search term: bopA
|
A genome-wide screen identifies a Bordetella type III secretion effector and candidate effectors in other species.
Panina EM, Mattoo S, Griffith N, Kozak NA, Yuk MH, Miller JF
Mol Microbiol 2005 Oct;58(1):267-79
PubMed ID: 16164564
|
Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592
|
Stimulation of autophagy suppresses the intracellular survival of Burkholderia pseudomallei in mammalian cell lines.
Cullinane M, Gong L, Li X, Lazar-Adler N, Tra T, Wolvetang E, Prescott M, Boyce JD, Devenish RJ, Adler B
Autophagy 2008 Aug;4(6):744-53
PubMed ID: 18483470
|
Coexpression and expression quantitative trait loci analyses of the angiogenesis gene-gene interaction network in prostate cancer.
Lin HY, Cheng CH, Chen DT, Chen YA, Park JY
Transl Cancer Res 2016 Oct;5(Suppl 5):S951-S963
PubMed ID: 28664150
|
Type III Secretion in the Melioidosis Pathogen <i>Burkholderia pseudomallei</i>.
Vander Broek CW, Stevens JM
Front Cell Infect Microbiol 2017;7:255
PubMed ID: 28664152
|