Burkholderia cenocepacia J2315, pBCA021 (traH)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	pBCA021
NCBI Locus Tag	QU43_RS72640
Name	traH
Replicon	plasmid pBCJ2315
Genomic location	29205 - 30659 (- strand)

Cross-References

RefSeq	WP_006487442.1
GI	206479946
Entrez	6926491
GI	206479946
INSDC	CAR57728.1
NCBI Locus Tag	QU43_RS72640
NCBI Old Locus Tag	pBCA021
RefSeq	WP_006487442.1,GeneID
UniParc	UPI00017BB2D8
UniProtKB Acc	B4EQN3
UniProtKB ID	B4EQN3_BURCJ
UniRef100	UniRef100_U1Z829
UniRef50	UniRef50_F4GGV7
UniRef90	UniRef90_U1Z829

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative TraH conjugative transfer protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.28
Kyte-Doolittle Hydrophobicity Value	-0.173
Molecular Weight (kDa)	52883.7
Isoelectric Point (pI)	5.78

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 52 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG007444 (39 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: pBCA021 Search term: traH Search term: putative TraH conjugative transfer protein

Human Homologs

References