Burkholderia cenocepacia J2315, BCAS0316

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAS0316
NCBI Locus Tag	QU43_RS70260
Name
Replicon	chromosome 3
Genomic location	350566 - 351354 (- strand)

Cross-References

RefSeq	WP_006486288.1
GI	197295165
Entrez	6804213
GI	197295165
INSDC	CAR57248.1
NCBI Locus Tag	QU43_RS70260
NCBI Old Locus Tag	BCAS0316
RefSeq	WP_006486288.1,GeneID
UniParc	UPI00017BB0BB
UniProtKB Acc	B4EQ82
UniProtKB ID	B4EQ82_BURCJ
UniRef100	UniRef100_A0A095EHM3
UniRef50	UniRef50_G0EYT5
UniRef90	UniRef90_Q39MU4

Product

Feature Type	CDS
Coding Frame	1
Product Name	short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-2.16
Kyte-Doolittle Hydrophobicity Value	0.240
Molecular Weight (kDa)	27421.0
Isoelectric Point (pI)	6.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG005365 (143 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAS0316 Search term: short chain dehydrogenase

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000326219 dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985] E-value: 5.1e-28 Percent Identity: 36.4
Ensembl 97, assembly GRCh38.p12	ENSP00000494364 dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985] E-value: 5.1e-28 Percent Identity: 36.4

References