Burkholderia cenocepacia J2315, BCAL1901 (rho)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1901
NCBI Locus Tag	QU43_RS46050
Name	rho
Replicon	chromosome 1
Genomic location	2098084 - 2099346 (+ strand)

Cross-References

RefSeq	WP_006478662.1
GI	206560265
Entrez	6932106
GI	206560265
INSDC	CAR52202.1
NCBI Locus Tag	QU43_RS46050
NCBI Old Locus Tag	BCAL1901
RefSeq	WP_006478662.1,GeneID
UniParc	UPI0000334DAD
UniProtKB Acc	B4EAY7
UniProtKB ID	B4EAY7_BURCJ
UniRef100	UniRef100_A0A071MBD8
UniRef50	UniRef50_Q9HTV1
UniRef90	UniRef90_A1V4M1

Product

Feature Type	CDS
Coding Frame	1
Product Name	transcription termination factor Rho
Synonyms
Evidence for Translation
Charge (pH 7)	-0.08
Kyte-Doolittle Hydrophobicity Value	-0.322
Molecular Weight (kDa)	47401.3
Isoelectric Point (pI)	6.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 574 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001666 (652 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1901 Search term: rho Search term: transcription termination factor Rho

Human Homologs

References