Burkholderia cenocepacia J2315, BCAL1266

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1266
NCBI Locus Tag	QU43_RS42825
Name
Replicon	chromosome 1
Genomic location	1376495 - 1377157 (+ strand)

Cross-References

RefSeq	WP_006476343.1
GI	206559643
Entrez	6931593
GI	206559643
INSDC	CAR51568.1
NCBI Locus Tag	QU43_RS42825
NCBI Old Locus Tag	BCAL1266
RefSeq	WP_006476343.1,GeneID
UniParc	UPI000052D780
UniProtKB Acc	B4E5F3
UniProtKB ID	RLME_BURCJ
UniRef100	UniRef100_Q1BXD0
UniRef50	UniRef50_Q2SUW0
UniRef90	UniRef90_Q2SUW0

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative ribosomal RNA large subunit methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	2.10
Kyte-Doolittle Hydrophobicity Value	-0.520
Molecular Weight (kDa)	24787.0
Isoelectric Point (pI)	7.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 298 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001133 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1266 Search term: putative ribosomal RNA large subunit methyltransferase

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000019019 FtsJ RNA 2'-O-methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:13254] E-value: 5.4e-23 Percent Identity: 32.5
Ensembl 97, assembly GRCh38.p12	ENSP00000326948 FtsJ RNA 2'-O-methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:13254] E-value: 5.4e-23 Percent Identity: 32.5

References