Apr 30, 2018 |
I35_RS21120
|
Burkholderia cenocepacia
H111 |
New gene name: bceS. New product name: acyltransferase BceS. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Note that another gene (BCAM1494) for a two-component sensor kinase in B. cenocepacia J2315 was also assigned the name bceS at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4477.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1891
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagB-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_I2393
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: fenI. New product name confidence: Class 2. New PubMed ID: 29087175. New comment: .Annotation transferred from: UniProtKB:Q9L7W7.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS08375
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bceS. New product name: acyltransferase BceS. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Note that another gene (BCAM1494) for a two-component sensor kinase in B. cenocepacia J2315 was also assigned the name bceS at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4477.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1890
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagC-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0188
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 28614901. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCEP18194_RS33295
|
Burkholderia lata
383 |
New gene name: bceS. New product name: acyltransferase BceS. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Note that another gene (BCAM1494) for a two-component sensor kinase in B. cenocepacia J2315 was also assigned the name bceS at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4477.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1889
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagD-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_1072
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hemP. New product name: Hemin uptake protein HemP. New product name confidence: Class 1. New PubMed ID: 28625994. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1010
|
Burkholderia cenocepacia
J2315 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1888
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssJ-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2297
|
Burkholderia cenocepacia
J2315 |
New gene name: hemP. New product name: Hemin uptake protein HemP. New product name confidence: Class 2. New PubMed ID: 28625994. New comment: .Annotation transferred from: BGD:Bmul_1072.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS06435
|
Burkholderia dolosa
AU0158 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1887
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssK-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS20270
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hemP. New product name confidence: Class 2. New PubMed ID: 28625994. New comment: .Annotation transferred from: BGD:Bmul_1072.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1682
|
Burkholderia pseudomallei
K96243 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1886
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssL-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3338
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 1. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0699
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1885
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssM-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-4 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM2626
|
Burkholderia cenocepacia
J2315 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 2. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon.Annotation transferred from: BGD:Bmul_3338.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g08580
|
Burkholderia glumae
BGR1 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Note that there is no gene annotated for bceU in B. glumae BGR1.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0855
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssM-5 . New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS16510
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 2. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon.Annotation transferred from: BGD:Bmul_3338.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_4605
|
Burkholderia multivorans
ATCC 17616 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0856
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssL-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3337
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuS. New product name: cytoplasmic heme-binding protein/heme oxygenase HmuS. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS16975
|
Burkholderia ambifaria
AMMD |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0857
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssK-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New PubMed ID: 28973030. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3336
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuT. New product name: periplasmic heme-binding protein HmuT. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS21125
|
Burkholderia cenocepacia
H111 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0858
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssJ-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3335
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuU. New product name: permease subunit of inner membrane heme transporter HmuU. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS08380
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0859
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagD-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3334
|
Burkholderia multivorans
ATCC 17616 |
New product name: ATP-binding cassette subunit of inner membrane heme transporter HmuV. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCEP18194_RS33290
|
Burkholderia lata
383 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0860
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagC-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II2139
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 1. New PubMed ID: 28746878. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1011
|
Burkholderia cenocepacia
J2315 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0861
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagB-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1884
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tseZ. New product name: type VI secretion system effector for zinc acquisition. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 28746878. New PubMed ID: 28746878. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS06430
|
Burkholderia dolosa
AU0158 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0862
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagAB-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 24595140. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS10755
|
Burkholderia cenocepacia
H111 |
New gene name: ntrC. New product name: NtrC. New PubMed ID: 28662146. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1681
|
Burkholderia pseudomallei
K96243 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0863
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssI-5. New product name confidence: Class 2. New subcellular localization: Extracellular (Class 2). New subcellular localization evidence code (ECO): ECO:0000044. New subcellular localization cross-ref: BGD:BPSS1503. New subcellular localization PMID: 24452686. New PubMed ID: 24452686. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1275
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0700
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0864
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssH-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1276
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_4604
|
Burkholderia multivorans
ATCC 17616 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0865
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssG-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1277
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS16980
|
Burkholderia ambifaria
AMMD |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0866
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssF-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1278
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS21130
|
Burkholderia cenocepacia
H111 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0867
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssE-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1279
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS08385
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0868
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssD-5. New product name synonym: hemolysin-coregulated protein Hcp-5. New product name confidence: Class 2. New subcellular localization: Extracellular (Class 2). New subcellular localization evidence code (ECO): ECO:0000044. New subcellular localization cross-ref: BGD:BPSS1498. New subcellular localization PMID: 21300775. New PubMed ID: 17660433. New PubMed ID: 21300775. New PubMed ID: 24595140. New PubMed ID: 21670170. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1280
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCEP18194_RS33285
|
Burkholderia lata
383 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0869
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssC-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1281
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0535
|
Burkholderia cenocepacia
J2315 |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15640.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0870
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssB-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1282
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS15640
|
Burkholderia cenocepacia
H111 |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 1. New PubMed ID: 29363827. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0871
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 17660433. New PubMed ID: 21300775. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 21670170. New PubMed ID: 26094804. New PubMed ID: 26159714. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1283
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: 1,6-Didesmethyltoxoflavin N_Methyltransferase. New product name confidence: Class 1. New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS04445
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15640.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0872
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 21670170. New PubMed ID: 21300775. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1284
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3051
|
Burkholderia multivorans
ATCC 17616 |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15640.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0873
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssA-5. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-5 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170). While other T6SSs were dispensible, T6SS-5 is required for virulence in a murine acute melioidosis model (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1285
|
Burkholderia thailandensis
E264 ATCC 700388 |
New PubMed ID: 28665591. New comment: Member of the toxoflavin-like gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS13285
|
Burkholderia dolosa
AU0158 |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15640.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0249
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06400
|
Burkholderia glumae
BGR1 |
New gene name: toxA. New product name: methyltransferase ToxA. New PubMed ID: 27070241. New comment: Further details in Identification of Proteins Involved in Toxin Production by Pseudomonas glumae. published in Japanese Journal of Phytopathology 64(2):75-79,January 1998..Annotation transferred from: GenBank:AAV52806.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS15650
|
Burkholderia ambifaria
AMMD |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15640.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0250
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagI-6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06410
|
Burkholderia glumae
BGR1 |
New gene name: toxB. New product name: ToxB. New product name confidence: Class 2. New PubMed ID: 27070241. New comment: Member of the toxoflavin biosynthesis gene cluster.Annotation transferred from: GenBank:AAV52807.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_I0210
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: rqpS. New product name: two-component regulatory system, sensor histidine kinase RqpS. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15640.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0251
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssJ-6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06420
|
Burkholderia glumae
BGR1 |
New gene name: toxC. New product name: ToxC. New product name confidence: Class 2. New PubMed ID: 27070241. New comment: Member of the toxoflavin biosynthesis gene cluster.Annotation transferred from: GenBank:AAV52808.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0534
|
Burkholderia cenocepacia
J2315 |
New gene name: rqpR. New product name: two-component regulatory system, response regulator RqpR. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0252
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssK-6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06430
|
Burkholderia glumae
BGR1 |
New gene name: toxD. New product name: ToxD. New PubMed ID: 27070241. New comment: Further details in Identification of Proteins Involved in Toxin Production by Pseudomonas glumae. published in Japanese Journal of Phytopathology 64(2):75-79,January 1998..Annotation transferred from: GenBank:AAV52809.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS15645
|
Burkholderia cenocepacia
H111 |
New gene name: rqpR. New product name: two-component regulatory system, response regulator RqpR. New product name confidence: Class 1. New PubMed ID: 29363827. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0253
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssL-6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06440
|
Burkholderia glumae
BGR1 |
New gene name: toxE. New product name: ToxE. New product name confidence: Class 2. New PubMed ID: 27070241. New comment: Member of the toxoflavin biosynthesis gene cluster.Annotation transferred from: GenBank:AAV52810.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS04450
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: rqpR. New product name: two-component regulatory system, response regulator RqpR. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0254
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system protein TssM-6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06390
|
Burkholderia glumae
BGR1 |
New gene name: toxR. New product name: LysR type regulatory protein ToxR. New product name confidence: Class 1. New PubMed ID: 19465657. New PubMed ID: 15522077. New PubMed ID: 27070241. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: .Annotation transferred from: GenBank:AAV52816.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3052
|
Burkholderia multivorans
ATCC 17616 |
New gene name: rqpR. New product name: two-component regulatory system, response regulator RqpR. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0255
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: type VI secretion system-associated protein TagF-6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: This gene is part of cluster known as the type VI secretion system gene cluster tss-6 based on naming convention used for B. pseudomallei described in PMID:17660433, however unlike B. pseudomallei, the numbers following the vgrG and hcp gene match the cluster number (PMID:20865170).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_2g06330
|
Burkholderia glumae
BGR1 |
New gene name: toxJ. New product name: LuxR family transcriptional regulator ToxJ. New product name confidence: Class 1. New PubMed ID: 19465657. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: .Annotation transferred from: GenBank:AAV52815.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS13280
|
Burkholderia dolosa
AU0158 |
New gene name: rqpR. New product name: two-component regulatory system, response regulator RqpR. New product name confidence: Class 2. New PubMed ID: 29363827. New comment: .Annotation transferred from: BGD:I35_RS15645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|