| Apr 22, 2009 |
BCAS0222
|
Burkholderia cenocepacia
J2315 |
New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 94% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
| Apr 22, 2009 |
BCAM0379
|
Burkholderia cenocepacia
J2315 |
New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 19% identity to RetS [P. aeruginosa]. New evidence reference (PMID): 18316384.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
| Apr 22, 2009 |
BCAM0857
|
Burkholderia cenocepacia
J2315 |
New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 90% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 92% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 100% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New homology: 90% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
| Apr 22, 2009 |
BCAM1868
|
Burkholderia cenocepacia
J2315 |
New product name: transcriptional regulator CepR. New product name confidence: Class 1. New homology: 99% identity to CepR[B. cepacia K56-2]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM0188
|
Burkholderia cenocepacia
J2315 |
New gene name: cepR2. New product name: CepR2. New product name confidence: Class 1. New evidence reference (PMID): 19201791.
|
Eoin O'Grady, University of Calgary Health Sciences Centre, Calgary, Alberta
|
| Apr 22, 2009 |
BCAL2686
|
Burkholderia cenocepacia
J2315 |
New product name: transcription factor CysB. New product name confidence: Class 1. New evidence reference (PMID): 16997956.
|
Literature review. Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland
|
| Apr 22, 2009 |
BCAL0998
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfA1. New product name: EcfA1. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL2872
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfA2. New product name: EcfA2. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL3478
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfB. New product name: sigma factor 70 EcfB. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL1369
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfC. New product name: sigma factor 70 EcfC. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL2360
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfD. New product name: sigma factor 70 EcfD. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL2462
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfE. New product name: sigma factor 70 EcfE. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL3151
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfF. New product name: sigma factor 70 EcfF. New product name confidence: Class 2. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL1947
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfG. New product name: sigma factor 70 EcfG. New product name confidence: Class 2. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM1661
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfH. New product name: sigma factor 70 EcfH. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 2. New evidence reference (PMID): 17784978.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM0001
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfJ. New product name: sigma factor 70 EcfJ. New product name confidence: Class 2. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM2748
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfK. New product name: sigma factor 70 EcfK. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM0849
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL3486
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL3378
|
Burkholderia cenocepacia
J2315 |
New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New evidence reference (PMID): 18057135.
|
Literature review. Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta.
|
| Apr 22, 2009 |
BCAL2739
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New evidence reference (PMID): 10625618. New evidence reference (PMID): 17522847.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL0207
|
Burkholderia cenocepacia
J2315 |
New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 63% identity to HppD[A. hydrophila]. New homology: 57% idenity to HppD[P. fluorescens]. New homology: 32% idenity to HppD[S. avermitilis]. New evidence reference (PMID): 17933889.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
| Apr 22, 2009 |
BCAL2829
|
Burkholderia cenocepacia
J2315 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 1. New evidence reference (PMID): 17220310.
|
Literature review. Valvano, M. A. University of Western Ontario, Ontario
|
| Apr 22, 2009 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New gene name: mgtC. New product name confidence: Class 1. New evidence reference (PMID): 16988222.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
| Apr 22, 2009 |
BCAM0004
|
Burkholderia cenocepacia
J2315 |
New gene name: parB. New product name: chromosome partitioning protein ParB. New product name confidence: Class 1. New homology: 92% identity to parB[B. cencoepacia AU 1054]. New evidence reference (PMID): 18328098. New evidence reference (PMID): 16452432.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM0005
|
Burkholderia cenocepacia
J2315 |
New gene name: repA. New product name: replication protein RepA. New product name confidence: Class 1. New homology: 97% identity to repA[B. cenocepacia AU 1054]. New evidence reference (PMID): 18328098.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL0813
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New evidence reference (PMID): 18195023.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
| Apr 22, 2009 |
BCAM0918
|
Burkholderia cenocepacia
J2315 |
New gene name: sigE. New product name: sigma factor 70 sigE. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM2371
|
Burkholderia cenocepacia
J2315 |
New gene name: sigI. New product name: sigma factor 70 sigI. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM1259
|
Burkholderia cenocepacia
J2315 |
New gene name: sigJ. New product name: sigma factor 70 SigJ. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL0144
|
Burkholderia cenocepacia
J2315 |
New gene name: sigK. New product name: sigma factor 70 SigK. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL1892
|
Burkholderia cenocepacia
J2315 |
New gene name: sigL. New product name: sigma factor 70 SigL. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL0787
|
Burkholderia cenocepacia
J2315 |
New gene name: sigM. New product name: sigma factor 70 SigM. New product name confidence: Class 2. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAL1656
|
Burkholderia cenocepacia
J2315 |
New product name: transcription factor SsuR. New product name confidence: Class 1. New evidence reference (PMID): 16997956.
|
Literature review. Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland
|
| Apr 22, 2009 |
BCAL3119
|
Burkholderia cenocepacia
J2315 |
New product name: WbiI. New product name confidence: Class 2. New homology: 67.8% identity to whpM[P. aeruginosa PAO1]. New homology: 99% identity to WbiI[accession number AY523838]. New evidence reference (PMID): 15364998.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM2307
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New evidence reference (PMID): 16790782.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
Bxe_A0793
|
Burkholderia xenovorans
LB400 |
New gene name: fusA. New product name confidence: Class 1. New evidence reference (PMID): 10625618. New evidence reference (PMID): 17522847.
|
Literature review. Geoffrey L. Winsor, Simon Fraser University
|