Motif View

Internal ID 1761247
Source Database TransTermHP TERM 997
Feature Type terminator
Name
Rho-independent transcription terminator TERM 997
Sequence TGCCCGCCTCGTGCGGGCG
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Start 3149047
End 3149065
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTCGTTCGCCTCCG(5' tail) TGCCCGC(5' stem) CTCGT(loop) GCGGGCG(3' stem) TTTTTTTTGGGGCGC(3' tail). Confidence: 100. overlap 3149048

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685