| Internal ID | 1585773 | Source Database | TransTermHP TERM 28 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 28
|
| Sequence |
CGGGCCGCTGGTTTGCACCGCGGCCCG Look for more occurrences |
| Start | 93319 |
| End | 93345 |
| Strand | + |
| Genomic Context | |
| Replicon | Burkholderia cenocepacia K56-2Valvano ctg7180000002940C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACGCGAACCGTATCC(5' tail) CGGGCCGCTGGT(5' stem) TTGC(loop) ACC-GCGGCCCG(3' stem) TTTGCATAGTTGGAA(3' tail). Confidence: 90. gap 1, opp_overlap 93305 93303, overlap 93306 93318 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|