Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAM2054
|
NCBI Locus Tag | QU43_RS64630 |
Name |
bcscD
|
Replicon | chromosome 2 |
Genomic location | 2284368 - 2285711 (- strand) |
RefSeq | WP_006498991.1 |
GI | 206563895 |
Entrez | 6929669 |
GI | 206563895 |
INSDC | CAR55913.1 |
NCBI Locus Tag | QU43_RS64630 |
NCBI Old Locus Tag | BCAM2054 |
RefSeq | WP_006498991.1,GeneID |
UniParc | UPI00017B9E8A |
UniProtKB Acc | B4EN97 |
UniProtKB ID | B4EN97_BURCJ |
UniRef100 | UniRef100_B4EN97 |
UniRef50 | UniRef50_B4EN97 |
UniRef90 | UniRef90_B4EN97 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type III secretion system protein
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -5.16 |
Kyte-Doolittle Hydrophobicity Value | 0.047 |
Molecular Weight (kDa) | 46318.0 |
Isoelectric Point (pI) | 5.88 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera
|
Burkholderia Ortholog Group |
BG003801 (246 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAM2054
Search term: bcscD
Search term: type III secretion system protein
|
A putative type III secretion gene cluster is widely distributed in the Burkholderia cepacia complex but absent from genomovar I.
Parsons YN, Glendinning KJ, Thornton V, Hales BA, Hart CA, Winstanley C
FEMS Microbiol Lett 2001 Sep 11;203(1):103-8
PubMed ID: 11557147
|
Sequence divergence in type III secretion gene clusters of the Burkholderia cepacia complex.
Glendinning KJ, Parsons YN, Duangsonk K, Hales BA, Humphreys D, Hart CA, Winstanley C
FEMS Microbiol Lett 2004 Jun 15;235(2):229-35
PubMed ID: 15183868
|