Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL3478
|
NCBI Locus Tag | QU43_RS54120 |
Name |
ecfB
|
Replicon | chromosome 1 |
Genomic location | 3817661 - 3818182 (+ strand) |
RefSeq | WP_006487309.1 |
GI | 206561815 |
Entrez | 6933231 |
GI | 206561815 |
INSDC | CAR53801.1 |
NCBI Locus Tag | QU43_RS54120 |
NCBI Old Locus Tag | BCAL3478 |
RefSeq | WP_006487309.1,GeneID |
UniParc | UPI00017B99CC |
UniProtKB Acc | B4E6K8 |
UniProtKB ID | B4E6K8_BURCJ |
UniRef100 | UniRef100_A0A0D1C479 |
UniRef50 | UniRef50_A0A0A3ZSI7 |
UniRef90 | UniRef90_G7HDC5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative RNA polymerase sigma factor
|
Synonyms |
sigma factor 70 EcfB |
Evidence for Translation | |
Charge (pH 7) | 2.48 |
Kyte-Doolittle Hydrophobicity Value | -0.394 |
Molecular Weight (kDa) | 19967.5 |
Isoelectric Point (pI) | 9.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 429 genera
|
Burkholderia Ortholog Group |
BG000007 (617 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL3478
Search term: ecfB
Search term: putative RNA polymerase sigma factor
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|