Burkholderia cenocepacia J2315, BCAL3151 (ecfF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL3151
NCBI Locus TagQU43_RS52475
Name
ecfF
Replicon chromosome 1
Genomic location 3440408 - 3441190 (- strand)

Cross-References

RefSeq WP_012492912.1
GI 206561495
Entrez 6933023
GI 206561495
INSDC CAR53474.1
NCBI Locus Tag QU43_RS52475
NCBI Old Locus Tag BCAL3151
RefSeq WP_012492912.1,GeneID
UniParc UPI00017B95DE
UniProtKB Acc B4ECU2
UniProtKB ID B4ECU2_BURCJ
UniRef100 UniRef100_A0A0D1C454
UniRef50 UniRef50_A4JBZ8
UniRef90 UniRef90_A0K531

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 2
Synonyms sigma factor 70 EcfF
Evidence for Translation
Charge (pH 7) 3.17
Kyte-Doolittle Hydrophobicity Value -0.305
Molecular Weight (kDa) 28048.3
Isoelectric Point (pI) 8.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000710 (631 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL3151
Search term: ecfF

Human Homologs

References

Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948