Burkholderia cenocepacia J2315, BCAL3090 (trmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL3090
NCBI Locus TagQU43_RS52175
Name
trmB
Replicon chromosome 1
Genomic location 3380990 - 3381766 (+ strand)

Cross-References

RefSeq WP_006488575.1
GI 206561436
Entrez 6933004
GI 206561436
INSDC CAR53414.1
NCBI Locus Tag QU43_RS52175
NCBI Old Locus Tag BCAL3090
RefSeq WP_006488575.1,GeneID
UniParc UPI00017B9907
UniProtKB Acc B4ECB1
UniProtKB ID B4ECB1_BURCJ
UniRef100 UniRef100_B4ECB1
UniRef50 UniRef50_Q13V14
UniRef90 UniRef90_A4JC58

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA (guanine-N(7)-)-methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -3.66
Kyte-Doolittle Hydrophobicity Value -0.401
Molecular Weight (kDa) 28756.3
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000772 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL3090
Search term: trmB

Human Homologs

References

No references are associated with this feature.