Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL2360
|
NCBI Locus Tag | QU43_RS48455 |
Name |
ecfD
|
Replicon | chromosome 1 |
Genomic location | 2615164 - 2615727 (+ strand) |
RefSeq | WP_006491033.1 |
GI | 206560719 |
Entrez | 6933756 |
GI | 206560719 |
INSDC | CAR52661.1 |
NCBI Locus Tag | QU43_RS48455 |
NCBI Old Locus Tag | BCAL2360 |
RefSeq | WP_006491033.1,GeneID |
UniParc | UPI00017B97D9 |
UniProtKB Acc | B4E5N8 |
UniProtKB ID | B4E5N8_BURCJ |
UniRef100 | UniRef100_A0A095DSA3 |
UniRef50 | UniRef50_Q0KCU5 |
UniRef90 | UniRef90_A0A071M5F0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase factor sigma-70
|
Synonyms |
sigma factor 70 EcfD |
Evidence for Translation | |
Charge (pH 7) | -11.09 |
Kyte-Doolittle Hydrophobicity Value | -0.487 |
Molecular Weight (kDa) | 21176.5 |
Isoelectric Point (pI) | 4.53 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 179 genera
|
Burkholderia Ortholog Group |
BG002152 (654 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL2360
Search term: ecfD
Search term: RNA polymerase factor sigma-70
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|