Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL0998
|
NCBI Locus Tag | QU43_RS41555 |
Name |
rpoE2
Synonym: ecfA1 |
Replicon | chromosome 1 |
Genomic location | 1085335 - 1085934 (+ strand) |
RefSeq | WP_006490873.1 |
GI | 206559391 |
Entrez | 6931376 |
GI | 206559391 |
NCBI Locus Tag | QU43_RS41555 |
NCBI Old Locus Tag | BCAL0998 |
RefSeq | WP_006490873.1,GeneID |
UniProtKB Acc | B4EAI0 |
UniProtKB ID | B4EAI0_BURCJ |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor RpoE
|
Synonyms |
EcfA1 |
Evidence for Translation | |
Charge (pH 7) | -2.79 |
Kyte-Doolittle Hydrophobicity Value | -0.372 |
Molecular Weight (kDa) | 22593.5 |
Isoelectric Point (pI) | 5.21 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | BGD |
Category | Alternative Sigma factors |
Evidence |
ECO:0000315
mutant phenotype evidence used in manual assertion
|
Host Organism | Mus musculus |
Notes | rpoE mutant cannot delay phagolysosomal fusion in mouse RAW 264.7 macrophages |
Reference | 18227267 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 496 genera
|
Burkholderia Ortholog Group |
BG000968 (655 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL0998
Search term: rpoE2
Search term: RNA polymerase sigma factor RpoE
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|
Burkholderia cenocepacia requires RpoE for growth under stress conditions and delay of phagolysosomal fusion in macrophages.
Flannagan RS, Valvano MA
Microbiology 2008 Feb;154(Pt 2):643-653
PubMed ID: 18227267
|