Burkholderia cenocepacia J2315, BCAL0909 (ybeY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0909
NCBI Locus TagQU43_RS41095
Name
ybeY
Replicon chromosome 1
Genomic location 990568 - 991344 (- strand)

Cross-References

RefSeq WP_006497372.1
GI 206559302
Entrez 6931311
GI 206559302
INSDC CAR51215.1
NCBI Locus Tag QU43_RS41095
NCBI Old Locus Tag BCAL0909
RefSeq WP_006497372.1,GeneID
UniParc UPI00017B8FED
UniProtKB Acc B4EBG0
UniProtKB ID B4EBG0_BURCJ
UniRef100 UniRef100_B4EBG0
UniRef50 UniRef50_Q8Y208
UniRef90 UniRef90_B4EBG0

Product

Feature Type CDS
Coding Frame 1
Product Name
rRNA maturation RNAse YbeY
Product Name Confidence: Class 2
Synonyms unkown domain/putative metalloprotease fusion protein
Evidence for Translation
Charge (pH 7) -11.65
Kyte-Doolittle Hydrophobicity Value -0.434
Molecular Weight (kDa) 28208.2
Isoelectric Point (pI) 4.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002551 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0909
Search term: ybeY

Human Homologs

References

Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing.
Davies BW, Köhrer C, Jacob AI, Simmons LA, Zhu J, Aleman LM, Rajbhandary UL, Walker GC
Mol Microbiol 2010 Oct;78(2):506-18
PubMed ID: 20807199
The Escherichia coli translation-associated heat shock protein YbeY is involved in rRNA transcription antitermination.
Grinwald M, Ron EZ
PLoS One 2013;8(4):e62297
PubMed ID: 23638028
YbeY, a heat shock protein involved in translation in Escherichia coli.
Rasouly A, Schonbrun M, Shenhar Y, Ron EZ
J Bacteriol 2009 Apr;191(8):2649-55
PubMed ID: 19181801