Burkholderia ambifaria MC40-6, BamMC406_3107 (parB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia ambifaria MC40-6
GCF_000019925.1|latest
Locus Tag
BamMC406_3107
NCBI Locus TagBAMMC406_RS15715
Name
parB
Replicon chromosome 2
Genomic location 2324 - 3385 (+ strand)

Cross-References

RefSeq WP_012365030.1
GI 172062147
Entrez 6181425
GI 172062147
NCBI Locus Tag BAMMC406_RS15715
NCBI Old Locus Tag BamMC406_3107
RefSeq WP_012365030.1
UniProtKB Acc B1YXN2
UniProtKB ID B1YXN2_BURA4

Product

Feature Type CDS
Coding Frame 1
Product Name
parB-like partition protein
Product Name Confidence: Class 1
Synonyms chromosome partitioning protein ParB
Evidence for Translation
Charge (pH 7) 9.45
Kyte-Doolittle Hydrophobicity Value -0.557
Molecular Weight (kDa) 39570.7
Isoelectric Point (pI) 9.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 274 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG004418 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BamMC406_3107
Search term: parB

Human Homologs

References

ParABS systems of the four replicons of Burkholderia cenocepacia: new chromosome centromeres confer partition specificity.
Dubarry N, Pasta F, Lane D
J Bacteriol 2006 Feb;188(4):1489-96
PubMed ID: 16452432