Burkholderia cenocepacia MC0-3, Bcenmc03_1598

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia MC0-3
GCF_000019505.1|latest
Locus Tag
Bcenmc03_1598
NCBI Locus TagBCENMC03_RS08110
Name
Replicon chromosome 1
Genomic location 1765206 - 1766408 (+ strand)

Cross-References

RefSeq WP_012328443.1
GI 170732946
Entrez 6123274
GI 170732946
INSDC ACA90771.1
NCBI Locus Tag BCENMC03_RS08110
NCBI Old Locus Tag Bcenmc03_1598
RefSeq WP_012328443.1
UniParc UPI0000E90570
UniProtKB Acc B1K117
UniProtKB ID B1K117_BURCC
UniRef100 UniRef100_B1K117
UniRef50 UniRef50_A3NUZ7
UniRef90 UniRef90_B4E8U6

Product

Feature Type CDS
Coding Frame 1
Product Name
periplasmic multidrug efflux lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 9.46
Kyte-Doolittle Hydrophobicity Value -0.201
Molecular Weight (kDa) 42483.9
Isoelectric Point (pI) 10.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
amrA amrA is the efflux pump subunit of the AmrAB-OprM multidrug efflux complex. amrA corresponds to 1 locus in Pseudomonas aeruginosa PAO1 and 1 locus in Pseudomonas aeruginosa LESB58. ARO:3002982 protein homolog model Strict 0.0 76.92 1.2.1

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 386 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001443 (622 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Bcenmc03_1598

Human Homologs

References

No references are associated with this feature.