Burkholderia vietnamiensis G4, Bcep1808_0893

Gene Feature Overview

Strain	Burkholderia vietnamiensis G4 GCF_000016205.1|latest
Locus Tag	Bcep1808_0893
NCBI Locus Tag	BCEP1808_RS04475
Name
Replicon	chromosome 1
Genomic location	974469 - 975779 (+ strand)

Cross-References

RefSeq	WP_011883689.1
GI	134295004
Entrez	4952590
GI	134295004
INSDC	ABO53904.1
NCBI Locus Tag	BCEP1808_RS04475
NCBI Old Locus Tag	Bcep1808_0893
RefSeq	WP_011883689.1
UniParc	UPI00003A549A
UniProtKB Acc	A4JCA1
UniProtKB ID	A4JCA1_BURVG
UniRef100	UniRef100_A4JCA1
UniRef50	UniRef50_P0AAZ6
UniRef90	UniRef90_J7J4M0

Product

Feature Type	CDS
Coding Frame	1
Product Name	recombination factor protein RarA
Synonyms
Evidence for Translation
Charge (pH 7)	-4.91
Kyte-Doolittle Hydrophobicity Value	-0.316
Molecular Weight (kDa)	48189.2
Isoelectric Point (pI)	6.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 643 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000812 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Bcep1808_0893 Search term: recombination factor protein RarA

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000477551 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876] E-value: 1.8e-78 Percent Identity: 40.8
Ensembl 97, assembly GRCh38.p12	ENSP00000370150 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876] E-value: 1.8e-78 Percent Identity: 40.8

References