Burkholderia vietnamiensis G4, Bcep1808_4217

Gene Feature Overview

Strain	Burkholderia vietnamiensis G4 GCF_000016205.1|latest
Locus Tag	Bcep1808_4217
NCBI Locus Tag	BCEP1808_RS21095
Name
Replicon	chromosome 2
Genomic location	1028343 - 1029809 (+ strand)

Cross-References

RefSeq	WP_011881549.1
GI	134292926
Entrez	4950434
GI	134292926
INSDC	ABO57197.1
NCBI Locus Tag	BCEP1808_RS21095
NCBI Old Locus Tag	Bcep1808_4217
RefSeq	WP_011881549.1
UniParc	UPI00005368AF
UniProtKB Acc	A4JLP4
UniProtKB ID	A4JLP4_BURVG
UniRef100	UniRef100_A4JLP4
UniRef50	UniRef50_J7JBJ8
UniRef90	UniRef90_J7JBJ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	sigma-54 dependent trancsriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-1.76
Kyte-Doolittle Hydrophobicity Value	-0.168
Molecular Weight (kDa)	52777.5
Isoelectric Point (pI)	6.75

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 460 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG003785 (942 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Bcep1808_4217 Search term: sigma-54 dependent trancsriptional regulator

Human Homologs

References