Burkholderia pseudomallei K96243, BPSS2337 (glnH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS2337
Name
glnH
Replicon chromosome 2
Genomic location 3152167 - 3152919 (- strand)

Cross-References

RefSeq YP_112339.1
GI 53723354
Entrez 3095223
GI 53723354
INSDC CAH39823.1
NCBI Locus Tag BPSS2337
RefSeq YP_112339.1,GeneID
UniParc UPI000043C03A
UniProtKB Acc Q63HT3
UniProtKB ID Q63HT3_BURPS
UniRef100 UniRef100_A0A069BJ47
UniRef50 UniRef50_P0AEQ5
UniRef90 UniRef90_A0A088X4Z9

Product

Feature Type CDS
Coding Frame 1
Product Name
glutamine ABC transporter periplasmic protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.71
Kyte-Doolittle Hydrophobicity Value -0.172
Molecular Weight (kDa) 27132.0
Isoelectric Point (pI) 9.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4F3P TRANSPORT PROTEIN 05/09/12 Crystal structure of a Glutamine-binding periplasmic protein from Burkholderia pseudomallei in complex with glutamine BURKHOLDERIA PSEUDOMALLEI 2.4 X-RAY DIFFRACTION 99.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001438 (1247 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS2337
Search term: glnH

Human Homologs

Ensembl 97, assembly GRCh38.p12
glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
E-value: 1.0e-06
Percent Identity: 29.3
Ensembl 97, assembly GRCh38.p12
glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
E-value: 1.0e-06
Percent Identity: 29.3
Ensembl 97, assembly GRCh38.p12
glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
E-value: 1.0e-06
Percent Identity: 29.3
Ensembl 97, assembly GRCh38.p12
glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
E-value: 1.0e-06
Percent Identity: 29.3
Ensembl 97, assembly GRCh38.p12
glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
E-value: 1.0e-06
Percent Identity: 29.3
Ensembl 97, assembly GRCh38.p12
glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
E-value: 1.0e-06
Percent Identity: 29.3

References

No references are associated with this feature.