Burkholderia pseudomallei K96243, BPSS2025

Gene Feature Overview

Strain	Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1|latest
Locus Tag	BPSS2025
Name
Replicon	chromosome 2
Genomic location	2736052 - 2737575 (- strand)

Cross-References

RefSeq	YP_112028.1
GI	53723043
Entrez	3095612
GI	53723043
NCBI Locus Tag	BPSS2025
RefSeq	YP_112028.1,GeneID
UniProtKB Acc	Q63IP4
UniProtKB ID	Q63IP4_BURPS

Product

Feature Type	CDS
Coding Frame	1
Product Name	decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7)	-6.41
Kyte-Doolittle Hydrophobicity Value	-0.177
Molecular Weight (kDa)	55693.7
Isoelectric Point (pI)	6.30

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 249 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG021030 (276 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BPSS2025 Search term: decarboxylase

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000362298 sphingosine-1-phosphate lyase 1 [Source:HGNC Symbol;Acc:HGNC:10817] E-value: 7.6e-81 Percent Identity: 39.1

References