Burkholderia pseudomallei K96243, BPSS1755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS1755
Name
Replicon chromosome 2
Genomic location 2406884 - 2408926 (- strand)

Cross-References

RefSeq YP_111761.1
GI 53722776
Entrez 3096687
GI 53722776
INSDC CAH39230.1
NCBI Locus Tag BPSS1755
RefSeq YP_111761.1,GeneID
UniParc UPI000043BDFA
UniProtKB Acc Q63JG1
UniProtKB ID Q63JG1_BURPS
UniRef100 UniRef100_Q3JKB2
UniRef50 UniRef50_A0A085FJ88
UniRef90 UniRef90_Q2T7M8

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor RpoD
Synonyms
Evidence for Translation
Charge (pH 7) -35.82
Kyte-Doolittle Hydrophobicity Value -0.604
Molecular Weight (kDa) 76744.6
Isoelectric Point (pI) 4.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003025 (663 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1755

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268