Burkholderia pseudomallei K96243, BPSS1679

Gene Feature Overview

Strain	Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1|latest
Locus Tag	BPSS1679
Name
Replicon	chromosome 2
Genomic location	2306033 - 2307187 (+ strand)

Cross-References

RefSeq	YP_111684.1
GI	53722699
Entrez	3096671
GI	53722699
INSDC	CAH39152.1
NCBI Locus Tag	BPSS1679
RefSeq	YP_111684.1,GeneID
UniParc	UPI000043BDAD
UniProtKB Acc	Q63JN8
UniProtKB ID	Q63JN8_BURPS
UniRef100	UniRef100_Q3JKJ9
UniRef50	UniRef50_Q3JKJ9
UniRef90	UniRef90_Q3JKJ9

Product

Feature Type	CDS
Coding Frame	1
Product Name	porin related exported protein
Synonyms
Evidence for Translation	Detected in B. pseudomallei strain DD503 using trypsin shaving and mass spectrometry (PMID:21391724). Found in at least two preparations. Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (33.9 kDa, pI 6.60, PMID:21960737)
Charge (pH 7)	2.18
Kyte-Doolittle Hydrophobicity Value	-0.214
Molecular Weight (kDa)	40166.1
Isoelectric Point (pI)	8.49

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization	Detected in Triton-insoluble fraction of lysozyme-treated B. pseudomallei DD503 cells using trypsin shaving and mass spectrometry (PMID:21391724).

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 65 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001192 (886 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BPSS1679 Search term: porin related exported protein

Human Homologs

References