Burkholderia pseudomallei K96243, BPSS0089

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS0089
Name
Replicon chromosome 2
Genomic location 107294 - 108781 (- strand)

Cross-References

RefSeq YP_110112.1
GI 53721127
Entrez 3095777
GI 53721127
INSDC CAH37535.1
NCBI Locus Tag BPSS0089
RefSeq YP_110112.1,GeneID
UniParc UPI000043B7AB
UniProtKB Acc Q63P57
UniProtKB ID Q63P57_BURPS
UniRef100 UniRef100_I1WQ35
UniRef50 UniRef50_A3NFN2
UniRef90 UniRef90_A3NFN2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.04
Kyte-Doolittle Hydrophobicity Value -0.259
Molecular Weight (kDa) 54853.8
Isoelectric Point (pI) 8.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 32 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG020403 (300 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS0089

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268