Burkholderia pseudomallei K96243, BPSL2246 (ppiB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL2246
Name
ppiB
Replicon chromosome 1
Genomic location 2708622 - 2709113 (+ strand)

Cross-References

RefSeq YP_108841.1
GI 53719855
Entrez 3094186
GI 53719855
INSDC CAH36248.1
NCBI Locus Tag BPSL2246
RefSeq YP_108841.1,GeneID
UniParc UPI000043B2E8
UniProtKB Acc Q63SS5
UniProtKB ID Q63SS5_BURPS
UniRef100 UniRef100_A0A069B2T0
UniRef50 UniRef50_Q8EG23
UniRef90 UniRef90_N0AAS3

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidyl-prolyl cis-trans isomerase B
Synonyms
Evidence for Translation
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (19.4 kDa, pI 6.55, PMID:21960737)
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (19.5 kDa, pI 6.28, PMID:21960737)
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (19.2 kDa, pI 6.18, PMID:21960737)
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (19.2 kDa, pI 6.39, PMID:21960737)
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (19.1 kDa, pI 6.02, PMID:21960737)
Charge (pH 7) -2.33
Kyte-Doolittle Hydrophobicity Value -0.402
Molecular Weight (kDa) 17890.1
Isoelectric Point (pI) 6.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3S6M ISOMERASE 05/25/11 The structure of a Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei BURKHOLDERIA PSEUDOMALLEI 1.651 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 552 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001973 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL2246
Search term: ppiB

Human Homologs

Ensembl 97, assembly GRCh38.p12
peptidylprolyl isomerase like 1 [Source:HGNC Symbol;Acc:HGNC:9260]
E-value: 2.6e-14
Percent Identity: 34.1

References

No references are associated with this feature.