Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS18925 (opcI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest |
| Locus Tag |
BURCENK562V_RS18925
|
| Name |
opcI
|
| Replicon | ctg7180000002940B |
| Genomic location | 2951218 - 2952252 (+ strand) |
Cross-References
| RefSeq | WP_012493053.1 |
| GI | 501469608 |
| GI | 501469608 |
| NCBI Locus Tag | BURCENK562V_RS18925 |
| RefSeq | WP_012493053.1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
porin
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 8.11 |
| Kyte-Doolittle Hydrophobicity Value | 0.147 |
| Molecular Weight (kDa) | 36083.4 |
| Isoelectric Point (pI) | 9.72 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG006317 (44 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BURCENK562V_RS18925
Search term: opcI
Search term: porin
|
Human Homologs
References
|
The Burkholderia cepacia epidemic strain marker is part of a novel genomic island encoding both virulence and metabolism-associated genes in Burkholderia cenocepacia.
Baldwin A, Sokol PA, Parkhill J, Mahenthiralingam E
Infect Immun 2004 Mar;72(3):1537-47
PubMed ID: 14977960
|