Burkholderia cenocepacia J2315, BCAL0115 (rpsU)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0115
NCBI Locus Tag	QU43_RS37075
Name	rpsU
Replicon	chromosome 1
Genomic location	136809 - 137021 (+ strand)

Cross-References

RefSeq	WP_006401410.1
GI	206558521
Entrez	6933583
GI	206558521
INSDC	CAR50423.1
NCBI Locus Tag	QU43_RS37075
NCBI Old Locus Tag	BCAL0115
RefSeq	WP_006401410.1,GeneID
UniParc	UPI00000AFB04
UniProtKB Acc	B4EDI9
UniProtKB ID	B4EDI9_BURCJ
UniRef100	UniRef100_A0A095EMF2
UniRef50	UniRef50_Q2T6K1
UniRef90	UniRef90_Q13SW3

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S21
Synonyms
Evidence for Translation
Charge (pH 7)	14.46
Kyte-Doolittle Hydrophobicity Value	-0.866
Molecular Weight (kDa)	8378.9
Isoelectric Point (pI)	11.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 319 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000149 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0115 Search term: rpsU Search term: 30S ribosomal protein S21

Human Homologs

References