Burkholderia cenocepacia J2315, BCAL0087

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0087
NCBI Locus Tag	QU43_RS36935
Name
Replicon	chromosome 1
Genomic location	107182 - 108714 (+ strand)

Cross-References

RefSeq	WP_012492258.1
GI	206558493
Entrez	6930737
GI	206558493
NCBI Locus Tag	QU43_RS36935
NCBI Old Locus Tag	BCAL0087
RefSeq	WP_012492258.1,GeneID
UniProtKB Acc	B4EF50
UniProtKB ID	B4EF50_BURCJ

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative reverse transcriptase-group II intron
Synonyms
Evidence for Translation
Charge (pH 7)	40.31
Kyte-Doolittle Hydrophobicity Value	-0.601
Molecular Weight (kDa)	59030.0
Isoelectric Point (pI)	11.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 251 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG005224 (380 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0087 Search term: putative reverse transcriptase-group II intron

Human Homologs

References