Burkholderia cenocepacia J2315, BCAL0036 (atpD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0036
NCBI Locus Tag	QU43_RS36670
Name	atpD
Replicon	chromosome 1
Genomic location	38673 - 40067 (+ strand)

Cross-References

RefSeq	WP_006482710.1
GI	206558440
Entrez	6933329
GI	206558440
INSDC	CAR50342.1
NCBI Locus Tag	QU43_RS36670
NCBI Old Locus Tag	BCAL0036
RefSeq	WP_006482710.1,GeneID
UniParc	UPI00017B90F4
UniProtKB Acc	B4EEY9
UniProtKB ID	ATPB_BURCJ
UniRef100	UniRef100_B4EEY9
UniRef50	UniRef50_P50002
UniRef90	UniRef90_Q13SQ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	F0F1 ATP synthase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7)	-11.17
Kyte-Doolittle Hydrophobicity Value	-0.110
Molecular Weight (kDa)	50568.5
Isoelectric Point (pI)	5.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
4Q4L	HYDROLASE	04/14/14	Crystal structure of an ATP synthase subunit beta 1 (F1-B1) from Burkholderia thailandensis	BURKHOLDERIA THAILANDENSIS	2.2	X-RAY DIFFRACTION	97.8

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000092 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0036 Search term: atpD Search term: F0F1 ATP synthase subunit beta

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000262030 ATP synthase F1 subunit beta [Source:HGNC Symbol;Acc:HGNC:830] E-value: 3.8e-180 Percent Identity: 69.1

References