Burkholderia cenocepacia J2315, BCAL0025 (gidB)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0025
NCBI Locus Tag	QU43_RS36615
Name	gidB
Replicon	chromosome 1
Genomic location	28952 - 29638 (+ strand)

Cross-References

RefSeq	WP_012492241.1
GI	206558429
Entrez	6933627
GI	206558429
INSDC	CAR50331.1
NCBI Locus Tag	QU43_RS36615
NCBI Old Locus Tag	BCAL0025
RefSeq	WP_012492241.1,GeneID
UniParc	UPI00017B90ED
UniProtKB Acc	B4E582
UniProtKB ID	RSMG_BURCJ
UniRef100	UniRef100_B4E582
UniRef50	UniRef50_Q0K5L7
UniRef90	UniRef90_B4E582

Product

Feature Type	CDS
Coding Frame	1
Product Name	16S rRNA methyltransferase GidB
Synonyms
Evidence for Translation
Charge (pH 7)	-1.56
Kyte-Doolittle Hydrophobicity Value	0.060
Molecular Weight (kDa)	24977.7
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 553 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000080 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0025 Search term: gidB Search term: 16S rRNA methyltransferase GidB

Human Homologs

References