Burkholderia cenocepacia J2315, BCAM0386

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00033
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 17 33 7.8E-11
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 17 76 5.46E-17
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 18 64 5.18982E-5
Pfam PF13412 Winged helix-turn-helix DNA-binding 17 64 7.7E-17
ProSiteProfiles PS50956 AsnC-type HTH domain profile. IPR000485 AsnC-type HTH domain 17 78 33.157
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 8 70 6.5E-22
SUPERFAMILY SSF54909 IPR011008 Dimeric alpha-beta barrel 81 165 8.45E-17
SMART SM00344 IPR019888 Transcription regulator AsnC-type 17 126 1.9E-38
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 44 63 7.8E-11
Gene3D G3DSA:3.30.70.920 71 153 4.8E-18
Pfam PF01037 Lrp/AsnC ligand binding domain IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain 87 157 1.5E-17
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 33 44 7.8E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.