Burkholderia cenocepacia J2315, BCAL1182

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00455
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.357.10 23 219 1.0E-60
SUPERFAMILY SSF48498 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 93 218 1.07E-31
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 27 73 4.3E-13
Pfam PF17938 Tetracyclin repressor-like, C-terminal domain IPR041474 HTH-type transcriptional repressor NicS, C-terminal 95 213 7.5E-43
ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 DNA-binding HTH domain, TetR-type 21 81 20.962
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 16 89 2.0E-19
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 48 71 1.0E-7
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 27 40 1.0E-7
Coils Coil 74 94 -
MobiDBLite mobidb-lite consensus disorder prediction 1 22 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.