Burkholderia cenocepacia J2315, BCAL1178

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 368 388 -
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 292 471 6.5E-23
SUPERFAMILY SSF56954 5 474 5.49E-95
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 68 260 1.3E-18
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 5.0
Gene3D G3DSA:1.20.1600.10 59 472 2.5E-105
Gene3D G3DSA:2.20.200.10 105 362 2.5E-105
TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family IPR010131 RND efflux system, outer membrane lipoprotein, NodT 15 472 1.2E-111

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.