Burkholderia pseudomallei K96243, BPSL1642

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00895 IPR011711 GntR, C-terminal 109 233 2.1E-19
Coils Coil 228 255 -
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 41 99 4.7E-16
Gene3D G3DSA:1.20.120.530 IPR008920 Transcription regulator FadR/GntR, C-terminal 106 243 1.1E-24
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 35 102 19.975
SUPERFAMILY SSF48008 IPR008920 Transcription regulator FadR/GntR, C-terminal 108 241 4.18E-23
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 43 96 1.7E-16
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 73 89 5.1E-6
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 34 103 2.42E-18
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 36 100 1.6409E-16
Pfam PF07729 FCD domain IPR011711 GntR, C-terminal 109 233 4.1E-27
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 33 100 4.5E-20
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 59 73 5.1E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.