Burkholderia cenocepacia H111, I35_RS18335 (copD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia H111
GCF_000236215.2|latest |
| Locus Tag |
I35_RS18335
|
| NCBI Old Locus Tag | I35_2408%2CI35_4353 |
| Name |
copD
|
| Replicon | chromosome 2 |
| Genomic location | 412480 - 413421 (+ strand) |
Cross-References
| RefSeq | WP_006495798.1 |
| GI | 493541930 |
| NCBI Locus Tag | I35_RS18335 |
| NCBI Old Locus Tag | I35_2408%2CI35_4353 |
| RefSeq | WP_006495798.1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
copper resistance protein CopD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 11.57 |
| Kyte-Doolittle Hydrophobicity Value | 0.881 |
| Molecular Weight (kDa) | 32535.2 |
| Isoelectric Point (pI) | 11.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG004581 (572 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: I35_RS18335
Search term: copD
Search term: copper resistance protein CopD
|
Human Homologs
References
|
Copper resistance genes of Burkholderia cenocepacia H111 identified by transposon sequencing.
Higgins S, Gualdi S, Pinto-Carbó M, Eberl L
Environ Microbiol Rep 2020 Apr;12(2):241-249
PubMed ID: 32090500
|