Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS18765

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00778	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00778	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00418		IPR001845	HTH ArsR-type DNA-binding domain	8	89	2.3E-12
ProSiteProfiles	PS50987	ArsR-type HTH domain profile.	IPR001845	HTH ArsR-type DNA-binding domain	1	95	13.62
CDD	cd00090	HTH_ARSR	IPR011991	ArsR-like helix-turn-helix domain	10	76	3.57159E-16
PRINTS	PR00778	Bacterial regulatory protein ArsR family signature	IPR001845	HTH ArsR-type DNA-binding domain	45	60	2.2E-7
PRINTS	PR00778	Bacterial regulatory protein ArsR family signature	IPR001845	HTH ArsR-type DNA-binding domain	60	75	2.2E-7
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	1	93	1.8E-19
PRINTS	PR00778	Bacterial regulatory protein ArsR family signature	IPR001845	HTH ArsR-type DNA-binding domain	10	25	2.2E-7
Pfam	PF12840	Helix-turn-helix domain			9	69	5.2E-16
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	2	93	1.42E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.