Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS18765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00778
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00778
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 10 25 2.2E-7
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 1 93 1.8E-19
ProSiteProfiles PS50987 ArsR-type HTH domain profile. IPR001845 HTH ArsR-type DNA-binding domain 1 95 13.62
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 45 60 2.2E-7
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 2 93 1.42E-22
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 10 76 3.57159E-16
SMART SM00418 IPR001845 HTH ArsR-type DNA-binding domain 8 89 2.3E-12
Pfam PF12840 Helix-turn-helix domain 9 69 5.2E-16
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 60 75 2.2E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.