Burkholderia pseudomallei 1026b, BP1026B_II1051
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 795 | 835 | 1.1E-5 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 1169 | 1199 | 1.4E-5 |
| TIGRFAM | TIGR03696 | Rhs_assc_core: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1334 | 1395 | 1.6E-21 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1169 | 1197 | 2.5E-5 |
| Gene3D | G3DSA:3.90.930.1 | 759 | 892 | 9.8E-9 | |||
| Gene3D | G3DSA:2.180.10.10 | 928 | 1395 | 5.2E-29 | |||
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1340 | 1360 | 1.7E-10 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 433 | 467 | 0.0025 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 859 | 889 | 4.6E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 774 | 810 | 1.9E-6 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 628 | 663 | 5.2E-7 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 754 | 794 | 3.2E-5 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 817 | 856 | 8.1E-8 |
| CDD | cd14742 | PAAR_RHS | 175 | 259 | 3.01962E-33 | ||
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 685 | 726 | 1.4E-10 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 665 | 700 | 1.5E-7 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1275 | 1304 | 1.8E-7 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 603 | 640 | 1.9E-7 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 665 | 699 | 1.7E-8 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 583 | 622 | 5.6E-6 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1363 | 1382 | 1.7E-10 |
| Coils | Coil | 1541 | 1541 | - | |||
| Gene3D | G3DSA:2.60.200.60 | 176 | 260 | 4.2E-20 | |||
| Gene3D | G3DSA:3.90.930.1 | 603 | 754 | 1.1E-5 | |||
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 645 | 681 | 7.2E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 862 | 893 | 1.0E-6 |
| Pfam | PF05488 | PAAR motif | IPR008727 | PAAR motif | 182 | 252 | 8.8E-18 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.