Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Sep 15, 2008 Bcep18194_C7411 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 89% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcep18194_C7399 New product name: putative protein tyrosine phosphatase. New product name confidence: Class 3. New homology: 35% identity and 55 % similarity to BceD [B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_C7398 New product name: putative protein tyrosine kinase. New product name confidence: Class 3. New homology: 37% identity and 56 similarity to BceF [B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Aug 25, 2008 Bcep18194_C7212 New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647. Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
Aug 25, 2008 Bcep18194_C6709 New gene name: prnD. New product name: PrnD. New product name confidence: Class 2. New homology: 92% identity to PrnD [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875. Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
Aug 25, 2008 Bcep18194_C6708 New gene name: prnC. New product name: PrnC. New product name confidence: Class 2. New homology: 97% identity to PrnC [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875. Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
Aug 25, 2008 Bcep18194_C6707 New gene name: prnB. New product name: PrnB. New product name confidence: Class 2. New homology: 90% identity to PrnB [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875. Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
Aug 25, 2008 Bcep18194_C6706 New gene name: prnA. New product name: tryptophan halogenase, PrnA. New product name confidence: Class 2. New homology: 94% identity to tryptophan halogenase, PrnA [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875. Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
Sep 15, 2008 Bcep18194_C6640 New gene name: ecfE. New product name: sigma factor 70 EcfE. New product name confidence: Class 1. New homology: 87% identity to ecfE[B. cenocepacia L2315]. New evidence reference (PMID): 1774948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_B2888 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 79% identity to AtsR [B. cenocepacia J2315]. New evidence reference (PMID): 18316384. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcep18194_B2866 New product name: putative protein tyrosine kinase. New product name confidence: Class 3. New homology: 36% identity and 54 % similarity to BceF [B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B2865 New product name: putative protein tyrosine phosphatase. New product name confidence: Class 3. New homology: 41% identity and 54% similarity to BceD [B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B2282 New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New homology: 77% identity to ecfL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_B2274 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 92% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B2272 New gene name: bceF. New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 94% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B2204 New gene name: sigE. New product name: sigma factor 70 SigE . New product name confidence: Class 1. New homology: 85% idenity to sigE[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_B1902 New gene name: sigJ. New product name: sigma factor 70 SigJ. New product name confidence: Class 1. New homology: 78% idenity to sigJ[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_B1816 New product name: putative protein tyrosine kinase. New product name confidence: Class 3. New homology: 33% identity and 53% similarity to BceF [B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B1379 New gene name: ecfH. New product name: sigma factor 70 EcfH. New product name confidence: Class 1. New homology: 75% identity to ecfH[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Aug 25, 2008 Bcep18194_B1180 New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 43% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257. Literature Review. Xun, L. Washington State University, Pullman, Washington
Sep 15, 2008 Bcep18194_B1053 New gene name: mgtC. New homology: 92% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222. Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
Sep 15, 2008 Bcep18194_B1052 New gene name: cepR. New product name: transcriptional regulator CepR. New product name confidence: Class 1. New homology: 96% identity to CepR[B. cepacia K56-2]. New evidence reference (PMID): 11402012. Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Center, Calgary, Alberta.
Sep 15, 2008 Bcep18194_B1050 New gene name: cepI. New product name: autoinducer synthase CepI. New product name confidence: Class 1. New homology: 99% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012. Literature review. Raymond C. Lo, Simon Fraser University
Sep 15, 2008 Bcep18194_B1050 New gene name: cepI. New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 91% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056. Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
Aug 1, 2008 Bcep18194_B0677 New product name: Fe(III)-pyochelin outer membrane receptor precursor. New product name confidence: Class 2. New homology: 60% identity to Fe[III]-pyochelin outer membrane receptor precursor [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 8288523. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_B0668 New gene name: pchB. New product name confidence: Class 2. New alternate product name: salicylate biosynthesis protein PchB. New homology: 73% identity to salicylate biosynthesis protein PchB[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11937513. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_B0667 New gene name: pchA. New product name confidence: Class 2. New homology: 48% identity to salicylate biosynthesis isochorismate synthase [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 7500944. New evidence reference (PMID): 12624097. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Sep 15, 2008 Bcep18194_B0597 New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class . New homology: 79% identity to ZmpB[B. cenocepacia J2315]. New evidence reference (PMID): 16790782. Literature review. Based on article by Sokol, P. A. University of Calgary, Calgary, Alberta.
Sep 15, 2008 Bcep18194_B0094 New gene name: ecfK. New product name: sigma factor 70 EcfK. New product name confidence: Class 1. New homology: 89% identity to ecfK [B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_B0004 New gene name: parB. New product name: chromosome partitioning protein ParB. New product name confidence: Class 1. New homology: 92% identity to parB[B. Cenocepacia AU 1054]. New evidence reference (PMID): 18328098. New evidence reference (PMID): 16452432. Literature review. Based on article by Mahenthiralingam, E. Warwick University, Coventry, UK; Lane, D. Centre National de Recherche Scientifique, France.
Sep 15, 2008 Bcep18194_A6145 New gene name: sigM. New product name: sigma factor 70 SigM. New homology: 91% identity to SigM[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_A6121 New gene name: rpoN. New product name confidence: Class 1. New homology: 91% identity to RpoN [B. cenocepacia J2315]. New evidence reference (PMID): 18195023. Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
Aug 25, 2008 Bcep18194_A5982 New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323. Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
Sep 15, 2008 Bcep18194_A5947 New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310. Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
Sep 15, 2008 Bcep18194_A5944 New gene name: coxG. New product name confidence: Class 2. New homology: 79% identity to CoxG[B. cenocepacia J2315]. New evidence reference (PMID): 17220310. Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
Sep 15, 2008 Bcep18194_A5860 New gene name: fusA. New product name confidence: Class 2. New homology: 94% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664. Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
Sep 15, 2008 Bcep18194_A5807 New gene name: cysB. New product name: transcription factor CysB. New product name confidence: Class 1. New homology: 99.0% identity to CysB [ B. cepacia IST408]. New evidence reference (PMID): 16997956. Literature review. Based on article by Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland.
Sep 15, 2008 Bcep18194_A5765 New gene name: sodC. New product name: superoxide dismutase, copper/zinc binding SodC. New product name confidence: Class 1. New subcellular localization confidence: Class 1. New evidence reference (PMID): 17325048. Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
Sep 15, 2008 Bcep18194_A5593 New gene name: ecfD. New product name: sigma factor 70 EcfD. New product name confidence: Class 1. New homology: 97% identity to ecfD[B. cenocepacia J2315]. New evidence reference (PMID): 1774948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_A5121 New gene name: sigL. New product name: sigma factor 70 SigL. New homology: 84% idenitty to SigL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Aug 1, 2008 Bcep18194_A4791 New gene name: pvdF. New product name: pyoverdine synthetase F. New product name confidence: Class 2. New homology: 94.2% identity to PvdF[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4790 New product name: ornibactin receptor precursor, OrbA. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 91% identity to ornibactin receptor precursor [B. cenocepacia K56-2]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11083764. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4789 New product name: L-ornithine N5-oxygenase. New product name confidence: Class 2. New homology: 51% identity to L-ornithine N5-oxygenase, PvdA[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4788 New product name: ornibactin biosynthesis protein, OrbK. New product name confidence: Class 3. New homology: 90% identity to ornibactin biosynthesis protein, OrbK[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4787 New product name: ornibactin biosynthesis non-ribosomal peptide, OrbJ. New product name confidence: Class 3. New homology: 92% identity to ornibactin biosynthesis non-ribosomal peptid, OrbJ[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4786 New product name: ornibactin biosynthesis non-ribosomal peptide, OrbI. New product name confidence: Class 3. New homology: 93% identity to ornibactin biosynthesis non-ribosomal peptide, OrbI[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4785 New product name: ornibactin biosynthesis ABC transport protein, OrbE. New product name confidence: Class 3. New homology: 97% identity to ornibactin biosynthesis ABC transport protein, OrbE[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4784 New product name: putative iron transport-related exported protein, OrbB. New product name confidence: Class 3. New homology: 94% identity to putative iron transport-related exported protein, OrbB [B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4782 New product name: putative iron transport-related membrane protein, OrbD. New product name confidence: Class 3. New homology: 96% identity to putative iron transport-related membrane protein, OrbD[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4781 New product name: putative iron transport-related ATP-binding protein, OrbC. New product name confidence: Class 3. New homology: 95% identity to putative iron transport-related ATP-binding protein, OrbC [B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4780 New product name: putative dioxygenase, OrbG. New product name confidence: Class 3. New homology: 98% identity to putative dioxygenase, OrbG[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcep18194_A4779 New product name confidence: Class 3. New alternate product name: OrbH. New homology: 96% identity to OrbH[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Sep 15, 2008 Bcep18194_A4778 New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 2. New homology: 90% identity to ecfI[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Aug 1, 2008 Bcep18194_A4778 New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 94% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Sep 15, 2008 Bcep18194_A4743 New gene name: ssuR. New product name: transcription factor SsuR. New product name confidence: Class 1. New homology: 99% identity to SsuR [B. cenocepacia J2315]. New evidence reference (PMID): 16997956. Literature review. Based on article by Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland.
Sep 15, 2008 Bcep18194_A4502 New gene name: ecfC. New product name: sigma factor 70 EcfC. New product name confidence: Class 1. New homology: 95% identity to ecfC[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_A4239 New gene name: ecfA1. New product name: sigma factor 70 EcfA1. New product name confidence: Class 1. New homology: 90% identity to EcfA1[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Aug 25, 2008 Bcep18194_A4085 New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560. Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
Sep 15, 2008 Bcep18194_A3984 New gene name: wbiI. New homology: 97% identity to wbiI[accession number AY523838]. New evidence reference (PMID): 15364998. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_A3906 New gene name: caiA. New product name confidence: Class 2. New homology: 95% identity to CaiA[B. cenocepacia J2315][accession number CAR53514.1]. New evidence reference (PMID): 17187664. Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
Sep 15, 2008 Bcep18194_A3735 New gene name: fur. New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New homology: 98% identity to Fur[B. cenocepacia J2315]. New evidence reference (PMID): 18057135. Literature review. Based on article by Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta..
Sep 15, 2008 Bcep18194_A3420 New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 97% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889. Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
Sep 15, 2008 Bcep18194_A3374 New homology: 99% identity ot SigK[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_A3204 New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New homology: 83% identity to ecfM [B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Sep 15, 2008 Bcep18194_A3197 New gene name: ecfB. New product name: sigma factor 70 EcfB. New product name confidence: Class 1. New homology: 87% identity to ecfB[B. cenocepacia J2315]. New evidence reference (PMID): 17784948. Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
Jan 25, 2011 Bcep1808_5793 Burkholderia vietnamiensis G4 New product name confidence: Class 2. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(ISS). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5793 Burkholderia vietnamiensis G4 New product name confidence: Class 2. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [ISS]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5791 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5791 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5790 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5790 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5789 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5789 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5788 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5788 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5787 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5787 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5786 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5786 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5785 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5785 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5784 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5784 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5783 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5783 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5782 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bcep1808_5782 Burkholderia vietnamiensis G4 New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Aug 25, 2008 Bcep1808_5413 Burkholderia vietnamiensis G4 New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257. Literature Review. Xun, L. Washington State University, Pullman, Washington
Sep 15, 2008 Bcep1808_5262 Burkholderia vietnamiensis G4 New gene name: cepI. New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New evidence reference (PMID): 17277056. Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
Sep 15, 2008 Bcep1808_5260 Burkholderia vietnamiensis G4 New gene name: cepR. New product name: transcriptional regulator CepR. New product name confidence: Class 1. New homology: 94% identity to CepR[B. cepacia K56-2]. New evidence reference (PMID): 11402012. Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
Sep 15, 2008 Bcep1808_5259 Burkholderia vietnamiensis G4 New gene name: mgtC. New homology: 91% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222. Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
Apr 10, 2015 Bcep1808_4480 Burkholderia vietnamiensis G4 New gene name: bceU. New product name: BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4479 Burkholderia vietnamiensis G4 New gene name: bceT. New product name: BceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4477 Burkholderia vietnamiensis G4 New gene name: bceS. New product name: BceS. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4476 Burkholderia vietnamiensis G4 New gene name: bceR. New product name: BceR. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4475 Burkholderia vietnamiensis G4 New gene name: bceQ. New product name: BceQ. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4474 Burkholderia vietnamiensis G4 New gene name: bceP. New product name: BceP. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4473 Burkholderia vietnamiensis G4 New gene name: bceO. New product name: BceO. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4472 Burkholderia vietnamiensis G4 New gene name: bceN. New product name: BceN. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4471 Burkholderia vietnamiensis G4 New gene name: bceM. New product name: BceM. New gene name synonym: `. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-II gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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