Apr 30, 2018 |
BCAL0351
|
Burkholderia cenocepacia
J2315 |
New gene name: tssM. New product name: type VI secretion system protein TssM. New gene name synonym: icmF. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 22102820. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1531
|
Burkholderia pseudomallei
K96243 |
New product name: translocator protein BipC (T3SS-3). New gene name synonym: sctB. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 27634329. New PubMed ID: 28028452. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1537
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1538.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0668
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3222
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURCENK562V_RS1
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 16790782 .New PubMed ID: 16790782.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
WJ59_RS21240
|
Burkholderia gladioli
MSMB1756 |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0352
|
Burkholderia cenocepacia
J2315 |
New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1532
|
Burkholderia pseudomallei
K96243 |
New product name: translocator protein BipB (T3SS-3). New gene name synonym: sctE. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BTH_II0834
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bsaU. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3223
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
LA03_RS18415
|
Burkholderia gladioli
UCD-UG_CHAPALOTE |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01700
|
Burkholderia cenocepacia
H111 |
New gene name: tssL. New product name: type VI secretion system protein TssL. New gene name synonym: bcsP. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1533
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion chaperone protein BicA (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 20345664. New PubMed ID: 25085508. New PubMed ID: 27997726. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. The B. pseudomallei bicA gene is able to partially complement a Salmonella sicA mutant, supporting a homologous function as chaperone (PMID:27997726).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1539
|
Burkholderia pseudomallei
K96243 |
New gene name: bsaU. New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0687
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3224
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURCENK562V_RS2
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: sodC. New product name: superoxide dismutase SodC. New product name confidence: Class 1. New subcellular localization: Periplasmic (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 17325048 .New PubMed ID: 17325048.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
D590_RS24420
|
Burkholderia gladioli
3848s-5 |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01705
|
Burkholderia cenocepacia
H111 |
New gene name: tssK. New product name: type VI secretion system protein TssK. New gene name synonym: bcsO. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 23921384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1534
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system export apparatus protein BsaZ (T3SS-3). New gene name synonym: sctU. New PubMed ID: 28664152. New PubMed ID: 18443088. New PubMed ID: 25635268. New PubMed ID: 12410823. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS668_A2169
|
Burkholderia pseudomallei
668 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0688
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3226
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAL0207
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 17933889.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bgla_1g01370
|
Burkholderia gladioli
BSR3 |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01710
|
Burkholderia cenocepacia
H111 |
New gene name: tssJ. New product name: type VI secretion system protein TssJ. New gene name synonym: bcsN. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 22102820. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster.Annotation transferred from: PDB:3RX9.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1535
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system inner membrane export apparatus protein BsaY (T3SS-3). New gene name synonym: sctT. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1710b_A058
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3242
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
XF14_RS22130
|
Burkholderia gladioli
SN82F6 |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01715
|
Burkholderia cenocepacia
H111 |
New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1536
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system inner membrane export apparatus protein BsaX (T3SS-3). New gene name synonym: sctS. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0696
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3243
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAL1929
|
Burkholderia cenocepacia
J2315 |
New gene name: arnT. New product name: aminoarabinose transferase.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BM43_RS24370
|
Burkholderia gladioli
ATCC 10248 |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01720
|
Burkholderia cenocepacia
H111 |
New gene name: tssB. New product name: type VI secretion system protein TssB. New gene name synonym: bcsL. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 20729192. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1537
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system inner membrane export apparatus protein BsaW (T3SS-3). New gene name synonym: sctR. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0746
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0734
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3281
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAL1932
|
Burkholderia cenocepacia
J2315 |
New gene name: arnC. New product name: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BGL01S_RS20465
|
Burkholderia gladioli
NBRC 13700 |
New product name: T3SS-secreted prophage tail-like protein. New product name confidence: Class 2. New subcellular localization: Host Associated (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization PMID: 28864820. New PubMed ID: 28864820. New comment: .Annotation transferred from: GenBank:AOO34660.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01725
|
Burkholderia cenocepacia
H111 |
New gene name: tssC. New product name: type VI secretion system protein TssC. New gene name synonym: bcsK. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 20729192. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1538
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system cystoplasmic ring protein BsaV (T3SS-3). New gene name synonym: sctQ. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10229_2066
|
Burkholderia mallei
NCTC 10229 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0750
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3290
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAL1933
|
Burkholderia cenocepacia
J2315 |
New gene name: arnA1. New product name: putative UDP-4-deoxy-4-formamido-l-arabinose formyltransferase. New product name confidence: Class 2.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1356
|
Burkholderia pseudomallei
K96243 |
New product name: regulatory protein. New product name confidence: Class 1. New PubMed ID: 24927285. New PubMed ID: 22354666. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01730
|
Burkholderia cenocepacia
H111 |
New gene name: tssD. New product name: type VI secretion system protein TssD. New gene name synonym: hcp. New product name synonym: hemolysin-coregulated protein Hcp. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000333. New subcellular localization PMID: 18316384. New PubMed ID: 8557353. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1539
|
Burkholderia pseudomallei
K96243 |
New product name: needle length control protein BsaU (T3SS-3). New gene name synonym: sctP. New PubMed ID: 28664152. New PubMed ID: 10944190. New PubMed ID: 16714590. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. BsaU is homologous to InvJ from Salmonella which is the molecular ruler which determines the length of the T3SS needle. (PMID: 10944190).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1538
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0776
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3297
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAL1934
|
Burkholderia cenocepacia
J2315 |
New gene name: arnA2. New product name: putative UDP-4′-keto-5′-carboxypentose decarboxylase. New product name confidence: Class 2.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSL3393
|
Burkholderia pseudomallei
K96243 |
New PubMed ID: 28890761. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01735
|
Burkholderia cenocepacia
H111 |
New gene name: tssE. New product name: type VI secretion system protein TssE. New gene name synonym: bcsI. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1540
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system stalk protein BsaT (T3SS-3). New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BTH_II0833
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bsaT. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0779
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3298
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURCENK562V_RS0
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: fliI. New product name: FliI. New product name confidence: Class 1. New PubMed ID: 11895941.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1493
|
Burkholderia cenocepacia
J2315 |
New gene name: bceR1. New product name: two-component regulatory system response regulator BceR1. New product name confidence: Class 1. New PubMed ID: 25519693. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01740
|
Burkholderia cenocepacia
H111 |
New gene name: tssF. New product name: type VI secretion system protein TssF. New gene name synonym: bcsH. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1541
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system ATPase BsaS (T3SS-3). New PubMed ID: 28664152. New PubMed ID: 25605762. New PubMed ID: 20345664. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1540
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0780
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3318
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2756
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 15175296.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1494
|
Burkholderia cenocepacia
J2315 |
New gene name: bceS1. New product name: two-component regulatory system sensor kinase BceS1. New product name confidence: Class 1. New PubMed ID: 25519693. New comment:
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01745
|
Burkholderia cenocepacia
H111 |
New gene name: tssG. New product name: type VI secretion system protein TssG. New gene name synonym: bcsG. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 23921384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1542
|
Burkholderia pseudomallei
K96243 |
New product name: chaperone protein BsaR (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 16164564. New PubMed ID: 14645290. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. BsaR is homologous to the Salmonella chaperone InvB which has been shown to be required for secretion of the effector proteins SopE and SopA (PMID:14645290). BsaR has been predicted to be the chaperone for BopE using a computational screen for chaperones in B. pseudomallei K96243 (PMID:16164564) but this has not been validated yet.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BURPS668_A2170
|
Burkholderia pseudomallei
668 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSL0793
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3319
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2757
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 15175296.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_2132
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hpnK. New product name confidence: Class 1. New PubMed ID: 22006009. New comment: Belongs to putative hopanoid biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01750
|
Burkholderia cenocepacia
H111 |
New gene name: tssH. New product name: type VI secretion system protein TssH. New gene name synonym: clpV. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 19131969. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1543
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system export apparatus protein BsaQ (T3SS-3). New gene name synonym: sctV. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 18654761. New PubMed ID: 16153244. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1710b_A058
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0796
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3320
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2758
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 12686638. New PubMed ID: 15175296.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_2133
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hpnJ. New product name confidence: Class 1. New PubMed ID: 22006009. New comment: Belongs to putative hopanoid biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01755
|
Burkholderia cenocepacia
H111 |
New gene name: tssA. New product name: type VI secretion system protein TssA. New gene name synonym: bcsE. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1544
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system gatekeeper protein BsaP (T3SS-3). New gene name synonym: sctW. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 25635268. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0798
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3331
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2759
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 12686638.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_2134
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hpnI. New product name confidence: Class 1. New PubMed ID: 22006009. New comment: Belongs to putative hopanoid biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01760
|
Burkholderia cenocepacia
H111 |
New gene name: tagL. New product name: type VI secretion system-associated protein TagL. New gene name synonym: bcsD. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1545
|
Burkholderia pseudomallei
K96243 |
New product name: type III secretion system outer membrane ring protein / secretin BsaO (T3SS-3). New gene name synonym: sctC. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 25591178. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0745
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL0799
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL3333
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2760
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 12686638.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|